Function reference • ewastools

All functions
`methylation_score()`	Various methylation scores
`correct_dye_bias()` `correct_dye_bias2()` `dont_normalize()`	Functions for preprocessing
`call_genotypes()` `mxm_()` `snp_outliers()` `eBeta()`	Genotype calling
`estimateLC()`	Cell composition
`check_sex()` `predict_sex()`	Infer the sex of sample donor
`check_snp_agreement()` `agreement_()` `enumerate_sample_donors()`	Agreement of SNPs
`control_metrics()` `sample_failure()`	Quality control metrics
`summits()` `detectionP()` `detectionP.neg()` `mask()` `eval_detP_cutoffs()` `detectionP.minfi()`	Detection p-values
`drop_samples()`	Drop samples from raw data.
`read_idats()`	Read .idat files

Reference